Sequence Similarity Clusters for the Entities in PDB 1BIU

Entity #1 | Chains: A,B,C
HIV-1 INTEGRASE protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13875
95 % 160 169 110 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 160 169 115
70 % 160 169 128
50 % 160 170 152
40 % 163 173 163
30 % 163 173 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures