Sequence Similarity Clusters for the Entities in PDB 1BIJ

Entity #1 | Chains: A,C
HEMOGLOBIN A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 145 208 26
95 % 169 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 170 240 35
70 % 209 321 18
50 % 494 730 5
40 % 499 735 9
30 % 916 1175 8
Entity #2 | Chains: B,D
HEMOGLOBIN A protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 158 53
95 % 176 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 179 244 31
70 % 225 335 14
50 % 495 730 5
40 % 500 735 9
30 % 917 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.