Sequence Similarity Clusters for the Entities in PDB 1BIJ

Entity #1 | Chains: A,C
HEMOGLOBIN A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 175 254 12
95 % 184 265 16 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 184 265 18
70 % 214 332 17
50 % 507 755 4
40 % 512 760 7
30 % 978 1299 6
Entity #2 | Chains: B,D
HEMOGLOBIN A protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 154 215 41
95 % 182 251 19 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 185 256 21
70 % 231 347 14
50 % 508 755 4
40 % 513 760 7
30 % 979 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures