Sequence Similarity Clusters for the Entities in PDB 1BIJ

Entity #1 | Chains: A,C
HEMOGLOBIN A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 152 222 22
95 % 174 250 20 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 175 251 21
70 % 214 332 16
50 % 506 754 4
40 % 511 759 8
30 % 955 1226 8
Entity #2 | Chains: B,D
HEMOGLOBIN A protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 113 169 51
95 % 181 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 184 255 19
70 % 230 346 14
50 % 507 754 4
40 % 512 759 8
30 % 956 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures