Sequence Similarity Clusters for the Entities in PDB 1BII

Entity #1 | Chains: A
MHC CLASS I H-2DD protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54070
95 % 1 1 39207
90 % 1 1 37460
70 % 8 9 2929
50 % 8 9 2895
40 % 8 9 2851
30 % 8 9 2658
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67786
95 % 2 2 34454
90 % 2 2 32931
70 % 2 2 29316
50 % 5 7 6526
40 % 8 10 4078
30 % 8 10 3762
Entity #3 | Chains: P
DECAMERIC PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.