Sequence Similarity Clusters for the Entities in PDB 1BII

Entity #1 | Chains: A
MHC CLASS I H-2DD protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51312
95 % 1 1 37183
90 % 1 1 35584
70 % 10 11 2088
50 % 10 11 2074
40 % 10 11 2077
30 % 10 11 1987
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64472
95 % 1 1 44302
90 % 1 1 42103
70 % 1 1 37073
50 % 3 5 7889
40 % 5 7 4937
30 % 5 7 4434
Entity #3 | Chains: P
DECAMERIC PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.