Sequence Similarity Clusters for the Entities in PDB 1BI9

Entity #1 | Chains: A,B,C,D
RETINAL DEHYDROGENASE TYPE II protein, length: 499 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16711
95 % 1 2 8131 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 8080
70 % 43 46 129
50 % 51 54 132
40 % 137 146 22
30 % 256 269 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.