Sequence Similarity Clusters for the Entities in PDB 1BI9

Entity #1 | Chains: A,B,C,D
RETINAL DEHYDROGENASE TYPE II protein, length: 499 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20044
95 % 5 6 2535 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 6 2604
70 % 48 51 137
50 % 57 61 136
40 % 151 160 28
30 % 274 288 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures