Sequence Similarity Clusters for the Entities in PDB 1BI8

Entity #1 | Chains: A,C
CYCLIN-DEPENDENT KINASE 6 protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 3406
95 % 12 16 3723 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.7
PDBFlex
90 % 12 16 3793
70 % 16 25 2275
50 % 416 433 66
40 % 444 465 54
30 % 4082 4337 2
Entity #2 | Chains: B,D
CYCLIN-DEPENDENT KINASE INHIBITOR protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27435
95 % 2 2 24065 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 23281
70 % 3 4 13805
50 % 3 4 12216
40 % 131 150 171
30 % 286 327 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures