Sequence Similarity Clusters for the Entities in PDB 1BI8

Entity #1 | Chains: A,C
CYCLIN-DEPENDENT KINASE 6 protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 2867
95 % 12 16 3567 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.6
PDBFlex
90 % 12 16 3618
70 % 16 25 2176
50 % 16 25 2160
40 % 441 462 49
30 % 3738 3961 2
Entity #2 | Chains: B,D
CYCLIN-DEPENDENT KINASE INHIBITOR protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29072
95 % 2 2 24129 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 23315
70 % 3 4 13712
50 % 3 4 12185
40 % 113 128 188
30 % 208 230 64

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures