Sequence Similarity Clusters for the Entities in PDB 1BI8

Entity #1 | Chains: A,C
CYCLIN-DEPENDENT KINASE 6 protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 3395
95 % 12 16 3707 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.6
PDBFlex
90 % 12 16 3776
70 % 16 25 2258
50 % 416 433 65
40 % 444 465 54
30 % 4046 4300 2
Entity #2 | Chains: B,D
CYCLIN-DEPENDENT KINASE INHIBITOR protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27271
95 % 2 2 23933 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 23159
70 % 3 4 13732
50 % 3 4 12159
40 % 131 150 170
30 % 286 327 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures