Sequence Similarity Clusters for the Entities in PDB 1BI4

Entity #1 | Chains: A,C
INTEGRASE protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6741
95 % 163 164 108 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 163 164 113
70 % 163 164 127
50 % 163 165 152
40 % 166 168 161
30 % 166 168 173
Entity #2 | Chains: B
INTEGRASE protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65321
95 % 164 164 108 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 164 164 113
70 % 164 164 127
50 % 164 165 152
40 % 167 168 161
30 % 167 168 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures