Sequence Similarity Clusters for the Entities in PDB 1BHX

Entity #1 | Chains: A
ALPHA THROMBIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 250 335 45
95 % 251 336 61 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 251 336 66
70 % 252 338 78
50 % 252 338 107
40 % 252 338 131
30 % 252 338 136
Entity #2 | Chains: B
ALPHA THROMBIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 22806
95 % 3 4 19665 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 4 19145
70 % 5 8 9114
50 % 5 8 8242
40 % 5 8 7562
30 % 36 50 1001
Entity #3 | Chains: F
ALPHA THROMBIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16017
95 % 5 9 8057 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.5
PDBFlex
90 % 5 9 8003
70 % 5 9 7747
50 % 5 9 7130
40 % 37 52 991
30 % 37 52 969
Entity #4 | Chains: E
ALPHA THROMBIN protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures