Sequence Similarity Clusters for the Entities in PDB 1BHX

Entity #1 | Chains: A
ALPHA THROMBIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 251 334 52
95 % 255 342 63 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 255 342 67
70 % 255 342 79
50 % 255 342 111
40 % 255 342 134
30 % 255 342 147
Entity #2 | Chains: B
ALPHA THROMBIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 20140
95 % 3 4 18257 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 4 17797
70 % 5 8 8847
50 % 5 8 8074
40 % 5 8 7386
30 % 39 53 982
Entity #3 | Chains: F
ALPHA THROMBIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15446
95 % 5 9 7890 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.5
PDBFlex
90 % 5 9 7821
70 % 5 9 7575
50 % 5 9 6968
40 % 40 55 953
30 % 40 55 951
Entity #4 | Chains: E
ALPHA THROMBIN protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures