Sequence Similarity Clusters for the Entities in PDB 1BHX

Entity #1 | Chains: A
ALPHA THROMBIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 251 335 45
95 % 252 336 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 252 336 65
70 % 253 338 77
50 % 253 338 102
40 % 253 338 125
30 % 253 338 137
Entity #2 | Chains: B
ALPHA THROMBIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 22519
95 % 3 4 19436 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 4 18922
70 % 5 8 9029
50 % 5 8 8154
40 % 5 8 7479
30 % 36 50 981
Entity #3 | Chains: F
ALPHA THROMBIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15807
95 % 5 9 7950 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.7
PDBFlex
90 % 5 9 7904
70 % 5 9 7664
50 % 5 9 7046
40 % 37 52 978
30 % 37 52 951
Entity #4 | Chains: E
ALPHA THROMBIN protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.