Sequence Similarity Clusters for the Entities in PDB 1BHM

Entity #1 | Chains: C,D
DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (BAMHI (E.C.3.1.21.4)) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 7144
95 % 5 5 7709
90 % 5 5 7662
70 % 5 5 7438
50 % 5 5 6855
40 % 5 5 6367
30 % 5 5 5686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.