Sequence Similarity Clusters for the Entities in PDB 1BHH

Entity #1 | Chains: A
T-LYMPHOCYTE-SPECIFIC PROTEIN TYROSINE KINASE P56LCK protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 5967
95 % 5 12 5020 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 5 12 5035
70 % 5 15 3884
50 % 49 79 533
40 % 83 134 234
30 % 109 231 153
Entity #2 | Chains: B
P56 LCK TYROSINE KINASE SH2 DOMAIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 5967
95 % 6 12 5020 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 6 12 5035
70 % 6 15 3884
50 % 50 79 533
40 % 84 134 234
30 % 110 231 153

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures