Sequence Similarity Clusters for the Entities in PDB 1BGY

Entity #1 | Chains: A,M
CYTOCHROME BC1 COMPLEX protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 23 1227
95 % 22 28 1285
90 % 22 29 1235
70 % 36 46 665
50 % 36 46 711
40 % 36 46 747
30 % 44 54 636
Entity #10 | Chains: J,V
CYTOCHROME BC1 COMPLEX protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 26 979
95 % 22 31 1132
90 % 22 31 1161
70 % 35 45 684
50 % 35 45 730
40 % 35 45 766
30 % 35 45 758
Entity #11 | Chains: K,W
CYTOCHROME BC1 COMPLEX protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 10277
95 % 15 21 2005
90 % 15 22 1871
70 % 15 22 1894
50 % 15 22 1904
40 % 15 22 1908
30 % 15 22 1837
Entity #2 | Chains: B,N
CYTOCHROME BC1 COMPLEX protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1230
95 % 23 29 1287
90 % 24 33 1130
70 % 37 47 666
50 % 37 47 713
40 % 37 47 749
30 % 37 47 739
Entity #3 | Chains: C,O
CYTOCHROME BC1 COMPLEX protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1123
95 % 21 24 1547
90 % 21 28 1239
70 % 35 45 667
50 % 43 53 598
40 % 50 61 452
30 % 50 61 448
Entity #4 | Chains: D,P
CYTOCHROME BC1 COMPLEX protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 1034
95 % 20 28 1299
90 % 20 28 1318
70 % 33 42 752
50 % 41 50 650
40 % 41 50 683
30 % 48 58 472
Entity #5 | Chains: E,Q
CYTOCHROME BC1 COMPLEX protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 21 1527
95 % 19 24 1561
90 % 20 27 1450
70 % 33 41 809
50 % 41 49 682
40 % 48 57 485
30 % 48 57 486
Entity #6 | Chains: F,R
CYTOCHROME BC1 COMPLEX protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 22 1252
95 % 21 28 1227
90 % 22 31 1155
70 % 35 45 681
50 % 35 45 725
40 % 35 45 761
30 % 35 45 754
Entity #7 | Chains: G,S
CYTOCHROME BC1 COMPLEX protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 23 1218
95 % 21 28 1229
90 % 22 31 1159
70 % 22 31 1195
50 % 35 45 729
40 % 35 45 765
30 % 35 45 757
Entity #8 | Chains: H,T
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 1498
95 % 19 24 1711
90 % 32 38 848
70 % 34 41 793
50 % 34 41 840
40 % 34 41 867
30 % 34 41 854
Entity #9 | Chains: I,U
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 15 2432
95 % 14 16 2721
90 % 14 17 2517
70 % 14 17 2501
50 % 16 19 2041
40 % 16 19 2046
30 % 16 19 1955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.