Sequence Similarity Clusters for the Entities in PDB 1BGY

Entity #1 | Chains: A,M
CYTOCHROME BC1 COMPLEX protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 24 1205
95 % 23 29 1262 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 23 33 1058
70 % 37 50 628
50 % 37 50 671
40 % 37 50 705
30 % 45 58 594
Entity #10 | Chains: J,V
CYTOCHROME BC1 COMPLEX protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 27 974
95 % 23 32 1123 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 2.4
PDBFlex
90 % 23 32 1149
70 % 36 49 644
50 % 36 49 688
40 % 36 49 717
30 % 36 49 715
Entity #11 | Chains: K,W
CYTOCHROME BC1 COMPLEX protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10805
95 % 15 21 2123 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 15 22 1964
70 % 15 25 1555
50 % 15 25 1596
40 % 15 25 1617
30 % 15 25 1587
Entity #2 | Chains: B,N
CYTOCHROME BC1 COMPLEX protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 25 1206
95 % 24 30 1263 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 25 34 1131
70 % 38 51 629
50 % 38 51 672
40 % 38 51 706
30 % 38 51 704
Entity #3 | Chains: C,O
CYTOCHROME BC1 COMPLEX protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 25 1130
95 % 22 25 1540 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 22 29 1215
70 % 36 49 631
50 % 44 57 566
40 % 51 65 445
30 % 51 65 445
Entity #4 | Chains: D,P
CYTOCHROME BC1 COMPLEX protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 26 1011
95 % 21 29 1273 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.2
PDBFlex
90 % 21 32 1113
70 % 34 46 682
50 % 42 54 610
40 % 42 54 642
30 % 49 62 464
Entity #5 | Chains: E,Q
CYTOCHROME BC1 COMPLEX protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 21 1627
95 % 19 24 1646 Flexibility: Low
Max RMSD: 8.4, Avg RMSD: 2.4
PDBFlex
90 % 20 30 1266
70 % 33 44 749
50 % 41 52 657
40 % 48 60 487
30 % 48 60 484
Entity #6 | Chains: F,R
CYTOCHROME BC1 COMPLEX protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 1327
95 % 22 29 1196 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 23 32 1146
70 % 36 49 642
50 % 36 49 683
40 % 36 49 713
30 % 36 49 712
Entity #7 | Chains: G,S
CYTOCHROME BC1 COMPLEX protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 24 1195
95 % 22 29 1198 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 23 32 1148
70 % 23 35 1056
50 % 36 49 687
40 % 36 49 716
30 % 36 49 714
Entity #8 | Chains: H,T
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 21 1593
95 % 19 30 1199 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 32 44 689
70 % 35 48 652
50 % 35 48 695
40 % 35 48 726
30 % 35 48 723
Entity #9 | Chains: I,U
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 15 2562
95 % 14 16 2847 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 4.1
PDBFlex
90 % 14 17 2633
70 % 14 17 2618
50 % 16 19 2138
40 % 16 19 2133
30 % 16 19 2044

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.