Sequence Similarity Clusters for the Entities in PDB 1BGS

Entity #1 | Chains: A,B,C
BARNASE protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 20 713
95 % 41 48 304 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 41 48 315
70 % 46 54 314
50 % 46 54 370
40 % 46 54 393
30 % 46 54 395
Entity #2 | Chains: E,F,G
BARSTAR protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 4422
95 % 13 18 1189 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 13 18 1218
70 % 13 18 1257
50 % 13 18 1310
40 % 13 18 1320
30 % 13 18 1295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.