Sequence Similarity Clusters for the Entities in PDB 1BGS

Entity #1 | Chains: A,B,C
BARNASE protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 20 730
95 % 41 48 313 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 41 48 327
70 % 46 54 329
50 % 46 54 392
40 % 46 54 422
30 % 46 54 420
Entity #2 | Chains: E,F,G
BARSTAR protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 4541
95 % 13 18 1222 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 13 18 1250
70 % 13 18 1282
50 % 13 18 1341
40 % 13 18 1351
30 % 13 18 1326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures