Sequence Similarity Clusters for the Entities in PDB 1BGS

Entity #1 | Chains: A,B,C
BARNASE protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 33 405
95 % 41 48 322 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.7
PDBFlex
90 % 41 48 333
70 % 46 54 335
50 % 46 54 403
40 % 46 54 430
30 % 46 54 438
Entity #2 | Chains: E,F,G
BARSTAR protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 3398
95 % 13 18 1268 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 13 18 1290
70 % 13 18 1313
50 % 13 18 1364
40 % 13 18 1356
30 % 13 18 1347

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures