Sequence Similarity Clusters for the Entities in PDB 1BGO

Entity #1 | Chains: A
CATHEPSIN K protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 45 750
95 % 43 52 856 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 43 52 889
70 % 43 53 896
50 % 166 195 138
40 % 196 235 125
30 % 227 274 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures