Sequence Similarity Clusters for the Entities in PDB 1BGD

Entity #1 | Chains: A
GRANULOCYTE COLONY-STIMULATING FACTOR protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25549
95 % 2 2 23937 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 2 2 23165
70 % 5 9 3384
50 % 5 9 3306
40 % 5 9 3182
30 % 5 9 2943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures