Sequence Similarity Clusters for the Entities in PDB 1BGB

Entity #1 | Chains: C,D
DNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ECORV ENDONUCLEASE protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 23 729
95 % 10 31 692
90 % 10 31 724
70 % 10 31 769
50 % 10 31 814
40 % 10 31 837
30 % 10 31 833

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.