Sequence Similarity Clusters for the Entities in PDB 1BFT

Entity #1 | Chains: A,B
NUCLEAR FACTOR NF-KAPPA-B P65 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33292
95 % 1 1 28675 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 27548
70 % 1 1 24834
50 % 7 24 1435
40 % 7 24 1386
30 % 7 24 1379

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures