Sequence Similarity Clusters for the Entities in PDB 1BFS

Entity #1 | Chains: A
NUCLEAR FACTOR NF-KAPPA-B P50 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16257
95 % 6 10 4341 Flexibility: Low
Max RMSD: 17.6, Avg RMSD: 2.6
PDBFlex
90 % 6 10 4370
70 % 6 10 4294
50 % 9 24 1392
40 % 9 24 1398
30 % 9 24 1380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures