Sequence Similarity Clusters for the Entities in PDB 1BFS

Entity #1 | Chains: A
NUCLEAR FACTOR NF-KAPPA-B P50 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15874
95 % 6 10 4242 Flexibility: Low
Max RMSD: 17.6, Avg RMSD: 2.6
PDBFlex
90 % 6 10 4270
70 % 6 10 4195
50 % 9 24 1362
40 % 9 24 1369
30 % 9 24 1351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.