Sequence Similarity Clusters for the Entities in PDB 1BFO

Entity #1 | Chains: A,C,E,G
CAMPATH-1G ANTIBODY protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20748
95 % 1 1 18039 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 1 17597
70 % 1142 2264 1
50 % 2337 4587 1
40 % 2337 4587 1
30 % 2664 5392 1
Entity #2 | Chains: B,D,F,H
CAMPATH-1G ANTIBODY protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20676
95 % 1 1 17984 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 1 17559
70 % 1136 2222 2
50 % 2338 4587 1
40 % 2338 4587 1
30 % 2665 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.