Sequence Similarity Clusters for the Entities in PDB 1BFO

Entity #1 | Chains: A,C,E,G
CAMPATH-1G ANTIBODY protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21394
95 % 1 1 18593 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 1 18140
70 % 1200 2362 1
50 % 2453 4781 1
40 % 2453 4781 1
30 % 2795 5635 1
Entity #2 | Chains: B,D,F,H
CAMPATH-1G ANTIBODY protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21318
95 % 1 1 18534 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 1 18100
70 % 1189 2311 2
50 % 2454 4781 1
40 % 2454 4781 1
30 % 2796 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures