Sequence Similarity Clusters for the Entities in PDB 1BEU

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27298
95 % 41 61 825 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 41 61 862
70 % 41 65 771
50 % 41 68 697
40 % 46 93 350
30 % 46 95 344
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26145
95 % 41 63 796
90 % 41 63 825
70 % 41 64 845
50 % 48 85 358
40 % 48 85 377
30 % 50 87 365

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures