Sequence Similarity Clusters for the Entities in PDB 1BEM

Entity #1 | Chains: A
CYTOCHROME C PEROXIDASE protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43410
95 % 172 224 136 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 172 224 140
70 % 172 224 161
50 % 172 224 196
40 % 172 224 211
30 % 241 303 166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures