Sequence Similarity Clusters for the Entities in PDB 1BE3

Entity #1 | Chains: A
CYTOCHROME BC1 COMPLEX protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 24 1146
95 % 17 29 1234 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 17 30 1180
70 % 23 47 653
50 % 23 47 699
40 % 23 47 735
30 % 30 55 627
Entity #10 | Chains: J
CYTOCHROME BC1 COMPLEX protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 27 948
95 % 17 32 1096 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 17 32 1119
70 % 23 46 675
50 % 23 46 716
40 % 23 46 749
30 % 23 46 739
Entity #11 | Chains: K
CYTOCHROME BC1 COMPLEX protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10476
95 % 14 21 2045 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 14 22 1897
70 % 14 22 1924
50 % 14 22 1932
40 % 14 22 1933
30 % 14 22 1861
Entity #2 | Chains: B
CYTOCHROME BC1 COMPLEX protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 25 1147
95 % 17 30 1235 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 17 34 1099
70 % 23 48 654
50 % 23 48 700
40 % 23 48 736
30 % 23 48 729
Entity #3 | Chains: C
CYTOCHROME BC1 COMPLEX protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 25 1077
95 % 17 25 1464 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 17 29 1186
70 % 23 46 655
50 % 30 54 593
40 % 37 62 451
30 % 37 62 449
Entity #4 | Chains: D
CYTOCHROME BC1 COMPLEX protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 979
95 % 17 29 1244
90 % 17 29 1271
70 % 23 43 726
50 % 30 51 646
40 % 30 51 676
30 % 37 59 471
Entity #5 | Chains: E
CYTOCHROME BC1 COMPLEX protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 21 1565
95 % 17 24 1576 Flexibility: Low
Max RMSD: 8.4, Avg RMSD: 2.4
PDBFlex
90 % 17 27 1465
70 % 23 41 819
50 % 30 49 695
40 % 37 57 493
30 % 37 57 494
Entity #6 | Chains: F
CYTOCHROME BC1 COMPLEX protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 1278
95 % 17 29 1165 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 17 32 1116
70 % 23 46 671
50 % 23 46 713
40 % 23 46 747
30 % 23 46 737
Entity #7 | Chains: G
CYTOCHROME BC1 COMPLEX protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 24 1133
95 % 17 29 1168 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 17 32 1118
70 % 17 32 1149
50 % 23 46 714
40 % 23 46 748
30 % 23 46 738
Entity #8 | Chains: H
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 21 1529
95 % 17 24 1740 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 23 38 858
70 % 23 42 768
50 % 23 42 818
40 % 23 42 853
30 % 23 42 835
Entity #9 | Chains: I
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 15 2476
95 % 13 16 2765 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 4.0
PDBFlex
90 % 13 17 2555
70 % 13 17 2534
50 % 14 19 2073
40 % 14 19 2070
30 % 14 19 1983

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.