Sequence Similarity Clusters for the Entities in PDB 1BE3

Entity #1 | Chains: A
CYTOCHROME BC1 COMPLEX protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 30 1175
95 % 18 33 1212 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 18 37 1027
70 % 24 54 624
50 % 24 54 673
40 % 24 54 714
30 % 31 62 616
Entity #10 | Chains: J
CYTOCHROME BC1 COMPLEX protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 23 1797
95 % 18 36 1046 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 2.1
PDBFlex
90 % 18 36 1080
70 % 18 39 1008
50 % 18 39 1058
40 % 18 39 1072
30 % 18 39 1055
Entity #11 | Chains: K
CYTOCHROME BC1 COMPLEX protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11682
95 % 14 22 2135 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 14 22 2073
70 % 14 25 1715
50 % 14 25 1755
40 % 14 25 1745
30 % 14 25 1714
Entity #2 | Chains: B
CYTOCHROME BC1 COMPLEX protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 31 1176
95 % 18 34 1183 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 18 38 1077
70 % 24 55 621
50 % 24 55 671
40 % 24 55 711
30 % 24 55 717
Entity #3 | Chains: C
CYTOCHROME BC1 COMPLEX protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 29 1177
95 % 18 29 1395 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 18 33 1178
70 % 24 53 625
50 % 31 61 580
40 % 38 69 475
30 % 38 69 481
Entity #4 | Chains: D
CYTOCHROME BC1 COMPLEX protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 26 1351
95 % 17 29 1428 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.1
PDBFlex
90 % 17 32 1272
70 % 23 46 745
50 % 30 54 684
40 % 36 61 526
30 % 36 61 525
Entity #5 | Chains: E
CYTOCHROME BC1 COMPLEX protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 25 1506
95 % 18 25 1763 Flexibility: Low
Max RMSD: 8.4, Avg RMSD: 2.4
PDBFlex
90 % 18 31 1361
70 % 24 45 800
50 % 31 53 722
40 % 38 61 534
30 % 38 61 536
Entity #6 | Chains: F
CYTOCHROME BC1 COMPLEX protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 29 1160
95 % 18 33 1132 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 18 36 1082
70 % 24 53 616
50 % 24 53 668
40 % 24 53 709
30 % 24 53 713
Entity #7 | Chains: G
CYTOCHROME BC1 COMPLEX protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 28 1198
95 % 18 33 1133 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 18 36 1076
70 % 18 39 1005
50 % 24 53 663
40 % 24 53 705
30 % 24 53 711
Entity #8 | Chains: H
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 24 1701
95 % 17 30 1345 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 23 44 762
70 % 24 52 631
50 % 24 52 680
40 % 24 52 719
30 % 24 52 726
Entity #9 | Chains: I
CYTOCHROME BC1 COMPLEX protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 15 3071
95 % 13 16 3042 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 4.1
PDBFlex
90 % 13 17 2721
70 % 13 17 2703
50 % 14 19 2362
40 % 14 19 2330
30 % 14 19 2195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures