Sequence Similarity Clusters for the Entities in PDB 1BDY

Entity #1 | Chains: A,B
PROTEIN KINASE C protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47293
95 % 1 1 35357 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 2 2 24117
70 % 2 2 21916
50 % 2 3 15890
40 % 2 3 14130
30 % 2 3 12083

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures