Sequence Similarity Clusters for the Entities in PDB 1BDM

Entity #1 | Chains: A,B
MALATE DEHYDROGENASE protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34537
95 % 3 9 2973 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 9 3021
70 % 3 9 3007
50 % 10 25 1095
40 % 10 25 1110
30 % 42 219 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.