Sequence Similarity Clusters for the Entities in PDB 1BDJ

Entity #1 | Chains: A
CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 16 1568
95 % 62 74 299
90 % 63 75 310
70 % 63 75 354
50 % 71 84 385
40 % 79 93 357
30 % 193 256 113
Entity #2 | Chains: B
AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 23055
95 % 3 4 19765
90 % 3 4 19227
70 % 3 4 17701
50 % 3 4 15387
40 % 3 4 13712
30 % 3 4 11729

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.