Sequence Similarity Clusters for the Entities in PDB 1BDF

Entity #1 | Chains: A,B,C,D
RNA POLYMERASE ALPHA SUBUNIT protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19853
95 % 1 18 697 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.9
PDBFlex
90 % 1 18 728
70 % 1 18 779
50 % 1 18 829
40 % 1 18 863
30 % 1 18 847

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.