Sequence Similarity Clusters for the Entities in PDB 1BD9

Entity #1 | Chains: A,B
PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13705
95 % 3 4 13089 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 6 8087
70 % 7 11 4280
50 % 7 11 4111
40 % 7 12 3652
30 % 7 12 3412

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures