Sequence Similarity Clusters for the Entities in PDB 1BD9

Entity #1 | Chains: A,B
PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13472
95 % 3 4 12874 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 6 7955
70 % 7 11 4215
50 % 7 11 4050
40 % 7 12 3600
30 % 7 12 3364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures