Sequence Similarity Clusters for the Entities in PDB 1BD9

Entity #1 | Chains: A,B
PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 12897
95 % 3 4 12350 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 4 6 7644
70 % 6 9 4632
50 % 6 9 4447
40 % 6 10 3958
30 % 6 10 3647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.