Sequence Similarity Clusters for the Entities in PDB 1BD2

Entity #1 | Chains: A
HLA-A 0201 protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 197 52
95 % 202 246 58
90 % 243 294 36
70 % 554 692 6
50 % 556 697 6
40 % 594 748 10
30 % 649 868 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 488 600 2
95 % 523 644 3
90 % 529 653 4
70 % 679 885 4
50 % 691 907 3
40 % 691 907 9
30 % 691 907 14
Entity #3 | Chains: C
TAX PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
T CELL RECEPTOR ALPHA protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60556
95 % 1 1 42282
90 % 2 3 22190
70 % 144 258 71
50 % 155 289 83
40 % 155 289 102
30 % 3284 5440 1
Entity #5 | Chains: E
T CELL RECEPTOR BETA protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57837
95 % 18 29 1706
90 % 48 76 316
70 % 163 299 43
50 % 163 302 76
40 % 163 302 94
30 % 3285 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.