Sequence Similarity Clusters for the Entities in PDB 1BCU

Entity #1 | Chains: L
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 182 338 45
95 % 182 339 62
90 % 182 339 66
70 % 182 341 78
50 % 182 341 107
40 % 182 341 130
30 % 182 341 137
Entity #2 | Chains: H
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 290 58
95 % 198 377 35
90 % 200 384 39
70 % 200 408 46
50 % 200 408 84
40 % 1058 1719 4
30 % 1134 1869 6
Entity #3 | Chains: I
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures