Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20055
95 % 5 5 16005 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15676
70 % 5 5 14593
50 % 6 6 9677
40 % 6 6 8854
30 % 6 6 7659
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 17230
95 % 5 5 16002 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15673
70 % 5 5 14590
50 % 6 6 9811
40 % 6 6 8853
30 % 6 6 7658
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 2 B SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1GXS 2 B, D P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN B ISOENZYME II 4558 4.1.2.11 | Details
6 1BCR 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details