Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19927
95 % 5 5 15920 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15576
70 % 5 5 14498
50 % 6 6 9598
40 % 6 6 8783
30 % 6 6 7586
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 17134
95 % 5 5 15917 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15573
70 % 5 5 14495
50 % 6 6 9728
40 % 6 6 8782
30 % 6 6 7585
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 2 B SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1GXS 2 B, D P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN B ISOENZYME II 4558 4.1.2.11 | Details
6 1BCR 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details