Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 18700
95 % 5 5 14929 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 14619
70 % 5 5 13680
50 % 6 6 9058
40 % 6 6 8322
30 % 6 6 7205
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16036
95 % 5 5 14926 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 14616
70 % 5 5 13677
50 % 6 6 9198
40 % 6 6 8321
30 % 6 6 7204
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 2 B SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1GXS 2 B, D P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN B ISOENZYME II 4558 4.1.2.11 | Details
6 1BCR 2 B SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details