Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19636
95 % 5 5 15684 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15348
70 % 5 5 14299
50 % 6 6 9478
40 % 6 6 8677
30 % 6 6 7506
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16882
95 % 5 5 15681 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15345
70 % 5 5 14296
50 % 6 6 9610
40 % 6 6 8676
30 % 6 6 7505
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 1 A SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1BCR 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details