Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19754
95 % 5 5 15791 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15448
70 % 5 5 14391
50 % 6 6 9524
40 % 6 6 8712
30 % 6 6 7535
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16995
95 % 5 5 15788 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15445
70 % 5 5 14388
50 % 6 6 9655
40 % 6 6 8711
30 % 6 6 7534
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 1 A SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1GXS 1 A, C P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A ISOENZYME II 4558 4.1.2.11 | Details
6 1BCR 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details