Sequence Similarity Clusters for the Entities in PDB 1BCR

Entity #1 | Chains: A
SERINE CARBOXYPEPTIDASE II protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 18970
95 % 5 5 15133 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 5 5 14813
70 % 5 5 13857
50 % 6 6 9197
40 % 6 6 8446
30 % 6 6 7304
Entity #2 | Chains: B
SERINE CARBOXYPEPTIDASE II protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16288
95 % 5 5 15130 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 14810
70 % 5 5 13854
50 % 6 6 9336
40 % 6 6 8445
30 % 6 6 7303
Entity #3 | Chains: C
ANTIPAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WHS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
2 1WHT 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
3 1BCS 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details
4 3SC2 1 A SERINE CARBOXYPEPTIDASE II (CPDW-II) 4565 3.4.16.6 | Details
5 1GXS 1 A, C P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A ISOENZYME II 4558 4.1.2.11 | Details
6 1BCR 1 A SERINE CARBOXYPEPTIDASE II 4565 3.4.16.6 | Details