Sequence Similarity Clusters for the Entities in PDB 1BCP

Entity #1 | Chains: A,G
PERTUSSIS TOXIN protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12373
95 % 2 3 11954 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 11788
70 % 2 3 11112
50 % 2 3 9949
40 % 2 3 9026
30 % 2 3 7871
Entity #2 | Chains: B,H
PERTUSSIS TOXIN protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 12773
95 % 2 4 12257 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 4 12058
70 % 3 7 5595
50 % 3 7 5263
40 % 3 7 4947
30 % 3 7 4468
Entity #3 | Chains: C,I
PERTUSSIS TOXIN protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12774
95 % 2 3 12258 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 12059
70 % 4 7 5595
50 % 4 7 5263
40 % 4 7 4947
30 % 4 7 4468
Entity #4 | Chains: D,E,J,K
PERTUSSIS TOXIN protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5305
95 % 2 3 5951 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 5943
70 % 2 3 5808
50 % 2 3 5444
40 % 2 3 5113
30 % 2 3 4595
Entity #5 | Chains: F,L
PERTUSSIS TOXIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13653
95 % 2 3 12968
90 % 2 3 12756
70 % 2 3 11975
50 % 2 3 10690
40 % 2 3 9697
30 % 2 3 8443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.