Sequence Similarity Clusters for the Entities in PDB 1BC7

Entity #1 | Chains: A
DNA (5'-D(*GP*AP*CP*AP*GP*GP*AP*TP*GP*TP*G)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
DNA (5'-D(*CP*AP*CP*AP*TP*CP*CP*TP*GP*TP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
PROTEIN (ETS-DOMAIN PROTEIN) protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29623
95 % 2 3 24546 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 23754
70 % 2 4 13782
50 % 7 11 2826
40 % 7 11 2787
30 % 7 11 2610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.