Sequence Similarity Clusters for the Entities in PDB 1BBX

Entity #1 | Chains: A,B
DNA (5'-D(*CP*TP*AP*GP*CP*GP*CP*GP*CP*TP*AP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,D
DNA-BINDING PROTEIN 7D protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22384
95 % 7 8 7367
90 % 7 8 7336
70 % 22 24 2144
50 % 22 24 2128
40 % 22 24 2126
30 % 22 24 2030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.