Sequence Similarity Clusters for the Entities in PDB 1BBU

Entity #1 | Chains: A
PROTEIN (LYSYL-TRNA SYNTHETASE) protein, length: 504 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32089
95 % 1 2 26156 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 2 25273
70 % 6 7 7300
50 % 10 11 2653
40 % 19 24 697
30 % 19 24 690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures