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METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS
Sequence Clustering and Redundancy Reduction Results
1BBT
Sequence Clusters for the Sequence Entities in PDB 1BBT
Entity #1: Chains: 1 - FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP1) protein, length: 213 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 31100
95% 2 3 17701
90% 2 3 17189
70% 4 10 5197
50% 4 11 4489
40% 4 11 4217
30% 4 11 3830
Entity #2: Chains: 2 - FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20918
95% 2 3 17616
90% 2 3 17133
70% 4 11 4698
50% 4 11 4490
40% 4 11 4218
30% 9 153 137
Entity #3: Chains: 3 - FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20854
95% 2 3 17579
90% 2 3 17107
70% 4 10 5183
50% 4 11 4486
40% 4 21 262
30% 9 156 127
Entity #4: Chains: 4 - FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP4) protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 36656
95% 4 9 6081
90% 4 9 6065
70% 4 9 5905
50% 4 9 5520
40% 4 9 5152
30% 4 16 533
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.