Sequence Similarity Clusters for the Entities in PDB 1BBJ

Entity #1 | Chains: A,L
IGG4-KAPPA B72.3 FAB (LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40597
95 % 1 1 30894
90 % 2 5 7660
70 % 1506 2280 1
50 % 3055 4619 1
40 % 3055 4619 1
30 % 3576 5440 1
Entity #2 | Chains: B,H
IGG4-KAPPA B72.3 FAB (HEAVY CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40513
95 % 1 1 30848
90 % 1 1 29548
70 % 1478 2238 2
50 % 3056 4619 1
40 % 3056 4619 1
30 % 3577 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.