Sequence Similarity Clusters for the Entities in PDB 1BBJ

Entity #1 | Chains: A,L
IGG4-KAPPA B72.3 FAB (LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41142
95 % 1 1 31299
90 % 2 5 7763
70 % 1536 2327 1
50 % 3114 4713 1
40 % 3114 4713 1
30 % 3658 5567 1
Entity #2 | Chains: B,H
IGG4-KAPPA B72.3 FAB (HEAVY CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41058
95 % 1 1 31253 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 29931
70 % 1503 2280 2
50 % 3115 4713 1
40 % 3115 4713 1
30 % 3659 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.