Sequence Similarity Clusters for the Entities in PDB 1BBD

Entity #1 | Chains: L
IGG2A-KAPPA 8F5 FAB (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39682
95 % 7 13 3692
90 % 57 83 299
70 % 1348 2280 1
50 % 2747 4619 1
40 % 2747 4619 1
30 % 3167 5440 1
Entity #2 | Chains: H
IGG2A-KAPPA 8F5 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39897
95 % 2 2 30499
90 % 21 30 1132
70 % 1330 2238 2
50 % 2748 4619 1
40 % 2748 4619 1
30 % 3168 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.