Sequence Similarity Clusters for the Entities in PDB 1BB0

Entity #1 | Chains: A
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 171 338 45
95 % 171 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 171 339 67
70 % 171 341 78
50 % 171 341 109
40 % 171 341 132
30 % 171 341 140
Entity #2 | Chains: B
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 147 290 75
95 % 187 377 52 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 188 384 48
70 % 188 408 46
50 % 188 408 84
40 % 1096 1863 4
30 % 1103 1885 6
Entity #3 | Chains: C
HIRUGEN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures