Sequence Similarity Clusters for the Entities in PDB 1BAF

Entity #1 | Chains: L
IGG1-KAPPA AN02 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60645
95 % 7 10 3550 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 58 145 142
70 % 1510 2327 1
50 % 3063 4713 1
40 % 3063 4713 1
30 % 3586 5567 1
Entity #2 | Chains: H
IGG1-KAPPA AN02 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60280
95 % 1 1 42317
90 % 13 17 2866
70 % 1478 2280 2
50 % 3064 4713 1
40 % 3064 4713 1
30 % 3587 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.