Sequence Similarity Clusters for the Entities in PDB 1BAF

Entity #1 | Chains: L
IGG1-KAPPA AN02 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62645
95 % 7 10 3689 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 60 148 144
70 % 1615 2474 1
50 % 3275 5011 1
40 % 3275 5011 1
30 % 3864 5941 1
Entity #2 | Chains: H
IGG1-KAPPA AN02 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62265
95 % 1 1 43653
90 % 13 18 2676
70 % 1580 2424 2
50 % 3276 5011 1
40 % 3276 5011 1
30 % 3865 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures