Sequence Similarity Clusters for the Entities in PDB 1BAF

Entity #1 | Chains: L
IGG1-KAPPA AN02 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60681
95 % 7 10 3631 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 60 148 146
70 % 1653 2553 1
50 % 3360 5180 1
40 % 3818 5834 1
30 % 4743 7269 1
Entity #2 | Chains: H
IGG1-KAPPA AN02 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60680
95 % 1 1 49503
90 % 13 19 2551
70 % 1623 2511 2
50 % 3361 5180 1
40 % 3819 5834 1
30 % 4744 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures