Sequence Similarity Clusters for the Entities in PDB 1BAF

Entity #1 | Chains: L
IGG1-KAPPA AN02 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58882
95 % 7 10 3527 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 60 148 139
70 % 1563 2395 1
50 % 3173 4857 1
40 % 3609 5475 1
30 % 4467 6818 1
Entity #2 | Chains: H
IGG1-KAPPA AN02 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58881
95 % 1 1 48081
90 % 13 19 2457
70 % 1533 2355 2
50 % 3174 4857 1
40 % 3610 5475 1
30 % 4468 6818 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures