Sequence Similarity Clusters for the Entities in PDB 1BAB

Entity #1 | Chains: A,C
HEMOGLOBIN THIONVILLE (DEOXY) (ALPHA CHAIN) protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 209 26
95 % 9 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 9 241 35
70 % 9 322 17
50 % 24 734 5
40 % 24 739 9
30 % 113 1182 8
Entity #2 | Chains: B,D
HEMOGLOBIN THIONVILLE (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 159 53
95 % 8 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 8 245 32
70 % 8 336 13
50 % 25 734 5
40 % 25 739 9
30 % 114 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.