Sequence Similarity Clusters for the Entities in PDB 1BA8

Entity #1 | Chains: A
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 80 335 45
95 % 80 336 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 80 336 65
70 % 80 338 76
50 % 80 338 101
40 % 80 338 125
30 % 80 338 136
Entity #2 | Chains: B
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 290 55
95 % 84 374 35 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 84 381 38
70 % 84 405 43
50 % 84 405 78
40 % 565 1682 4
30 % 590 1831 6
Entity #3 | Chains: C
HIRUGEN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.