Sequence Similarity Clusters for the Entities in PDB 1B9D

Entity #1 | Chains: A
PROTEIN (INTEGRASE) protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 5006
95 % 72 170 113 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 72 170 117
70 % 72 170 131
50 % 72 171 156
40 % 73 174 167
30 % 74 175 184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures