Sequence Similarity Clusters for the Entities in PDB 1B9C

Entity #1 | Chains: A,B,C,D
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18619
95 % 233 253 67 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 246 293 37
70 % 251 299 31
50 % 252 301 79
40 % 262 314 94
30 % 447 527 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures