Sequence Similarity Clusters for the Entities in PDB 1B9C

Entity #1 | Chains: A,B,C,D
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19523
95 % 243 264 67 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 258 306 32
70 % 261 310 30
50 % 262 312 78
40 % 272 325 89
30 % 463 544 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures