Sequence Similarity Clusters for the Entities in PDB 1B9C

Entity #1 | Chains: A,B,C,D
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20630
95 % 216 236 72 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 228 274 37
70 % 231 278 46
50 % 232 279 82
40 % 233 280 100
30 % 423 496 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.