Sequence Similarity Clusters for the Entities in PDB 1B98

Entity #1 | Chains: A,M
PROTEIN (NEUROTROPHIN-4) protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16430
95 % 3 3 15316 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.4
PDBFlex
90 % 3 3 15036
70 % 3 3 14093
50 % 20 24 1311
40 % 20 24 1322
30 % 20 24 1298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures