Sequence Similarity Clusters for the Entities in PDB 1B8M

Entity #1 | Chains: A
PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR) protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63665
95 % 2 2 32296
90 % 2 2 30933
70 % 2 2 27664
50 % 15 23 1238
40 % 15 23 1256
30 % 15 23 1230
Entity #2 | Chains: B
PROTEIN (NEUROTROPHIN-4) protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 14681
95 % 1 3 13782
90 % 1 3 13536
70 % 1 3 12699
50 % 16 23 1238
40 % 16 23 1256
30 % 16 23 1230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.