Sequence Similarity Clusters for the Entities in PDB 1B8M

Entity #1 | Chains: A
PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR) protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64927
95 % 2 2 32963
90 % 2 2 31550
70 % 2 2 28178
50 % 15 23 1268
40 % 15 23 1287
30 % 15 23 1261
Entity #2 | Chains: B
PROTEIN (NEUROTROPHIN-4) protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 15033
95 % 1 3 14116
90 % 1 3 13855
70 % 1 3 12992
50 % 16 23 1268
40 % 16 23 1287
30 % 16 23 1261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.