Sequence Similarity Clusters for the Entities in PDB 1B8J

Entity #1 | Chains: A,B
PROTEIN (ALKALINE PHOSPHATASE) protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2024
95 % 10 47 387 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 10 47 418
70 % 10 47 463
50 % 10 47 538
40 % 10 47 578
30 % 10 47 572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.