Sequence Similarity Clusters for the Entities in PDB 1B8E

Entity #1 | Chains: A
PROTEIN (BETA-LACTOGLOBULIN) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 38 976
95 % 9 67 496 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.2
PDBFlex
90 % 9 67 531
70 % 9 68 553
50 % 9 69 575
40 % 9 70 608
30 % 9 70 611

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4CK4 1 A, B BETA_LACTOGLOBULIN-1/B NATURAL VARIANTS A AND B IN RATIO 60-40 9940
2 4TLJ 1 A, B Beta-lactoglobulin 9925
3 4NLJ 1 A, B Beta-lactoglobulin-1/B UNP residues 19-180 9940
4 4GNY 1 A Beta-lactoglobulin 9913
5 4NLI 1 A Beta-lactoglobulin-1/B UNP residues 19-180 9940
6 1B8E 1 A PROTEIN (BETA-LACTOGLOBULIN) 9913
7 4Y0S 1 A Beta-lactoglobulin 9925
8 3UEV 1 A Beta-lactoglobulin 9913
9 5EEE 1 A Beta-lactoglobulin 9913
10 5EED 1 A, B Beta-lactoglobulin-1/B natural variant A has mutation H20Y 9940
11 3NQ9 1 A Beta-lactoglobulin 9913
12 3NQ3 1 A Beta-lactoglobulin 9913
13 4Y0Q 1 A Beta-lactoglobulin 9913
14 3UEW 1 A Beta-lactoglobulin 9913
15 3UEU 1 A Beta-lactoglobulin 9913
16 4DQ4 1 A Beta-lactoglobulin UNP residues 17-178 9913
17 4Y0P 1 A Beta-lactoglobulin UNP RESIDUES 17-178 9913
18 3UEX 1 A Beta-lactoglobulin 9913
19 4DQ3 1 A Beta-lactoglobulin UNP residues 17-178 9913
20 4OMX 1 A beta-lactoglobulin 9925
21 3NPO 1 A Beta-lactoglobulin 9913
22 4LZU 1 A Beta-lactoglobulin UNP residues 17-178 9913
23 4Y0R 1 A Beta-lactoglobulin unp residues 17-178 9913
24 4IBA 1 A beta-lactoglobulin UNP residues 17-178 9913
25 1BSQ 1 A PROTEIN (BETA-LACTOGLOBULIN) 9913
26 4OMW 1 A, B, C, D Beta-lactoglobulin 9925
27 1GXA 1 A BETA-LACTOGLOBULIN 9913
28 1GX8 1 A BETA-LACTOGLOBULIN 9913
29 4IB9 1 A beta-lactoglobulin UNP residues 17-178 9913
30 4LZV 1 A Beta-lactoglobulin UNP residues 17-178 9913
31 1GX9 1 A BETA-LACTOGLOBULIN 9913
32 1B0O 1 A BETA-LACTOGLOBULIN 9913
33 2GJ5 1 A Beta-lactoglobulin 9913
34 5LKE 1 A Beta-lactoglobulin 9913
35 5IO5 1 A Beta-lactoglobulin 9913
36 5LKF 1 A Beta-lactoglobulin 9913
37 2R56 1 A, B Beta-lactoglobulin 9913
38 5IO7 1 A Beta-lactoglobulin 9913